The Single-Cell Multiomics Data Portal is a centralized platform designed to facilitate the discovery and access of single-cell multiomics datasets from major public databases worldwide.
Our goal is to aggregate metadata from various sources, providing researchers with a unified interface to search, filter, and download datasets without navigating multiple platforms.
Key Features
- Comprehensive Coverage: Metadata from CELLxGENE Census, Human Cell Atlas, GEO/SRA, PanglaoDB, and scMMO-atlas
- Unified Search: Search across all sources with a single query
- Direct Downloads: Access data URIs for immediate download without registration
- Rich Metadata: Cell counts, omics types, tissue information, and collection details
Current Statistics
- Total Datasets: 3,200+ curated entries
- Total Cells: 298+ million cells
- Data Sources: 5 major public databases
- Species: Human, Mouse, and 100+ other organisms
- Omics Types: scRNA-seq, scATAC-seq, Spatial Transcriptomics, Multiome, CITE-seq