Browse Datasets

Search and explore 10,839 single-cell multiomics datasets

Showing 1 - 20 of 10,839 datasets

Deep single-cell RNAseq of microglia and brain myeloid cells from various brain regions and developmental stages

GEO/SRAscRNA-seqMus musculus

Collection: 19057

1.82B cellsID: geo_GSE12302...

CAR-macrophage therapy for HER2-overexpressing advanced solid tumors: a phase 1 trial

GEO/SRAscRNA-seqHomo sapiens

Collection: 21697

500.00M cellsID: geo_GSE28574...

Deep single-cell RNAseq of postnatal day 7 microglia from wild type and Trem2 knockout brains

GEO/SRAscRNA-seqMus musculus

Collection: 19057

334.00M cellsID: geo_GSE12302...

Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion

GEO/SRAscATAC-seqHomo sapiens; Mus mu...

Collection: 16512;11154

200.00M cellsID: geo_GSE12978...

Spear-ATAC: Pooled, droplet-based, single-cell chromatin accessibility CRISPR screens

GEO/SRAMultiomeHomo sapiens

Collection: 21697

104.59M cellsID: geo_GSE16885...

Metabolic skewing in inflammatory hepatic Th17 cells regulates non-alcoholic fatty liver disease (NAFLD) pathogenesis

GEO/SRAscRNA-seqMus musculus

Collection: 17021

17.00M cellsID: geo_GSE13876...

Whole dataset: Raw counts only

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

11.44M cellsID: dcfd4feb-18a...

Comparative analysis of chromatin accessibility during chondrogenesis and in osteoarthritis

GEO/SRAscATAC-seqHomo sapiens

Collection: 24676

7.00M cellsID: geo_GSE27060...

The normal human lymph node cell classification and landscape defined by high-dimensional spatial proteomic

Human Cell AtlasscRNA-seq

Collection: To comprehensively classify in situ all cells in the human lymph node (LN) and provide spatial and mutual relational data for its constituents, we employed a 78-marker hyperplexed staining method, MIL...

7.00M cellsID: b10cd314-3e7...

Organism-wide cellular dynamics and epigenomic remodeling in mammalian aging

GEO/SRAscRNA-seqMus musculus

Collection: 24247

7.00M cellsID: geo_GSE28873...

Single-cell chromatin accessibility data using scATAC-seq

GEO/SRAscATAC-seqMus musculus; Homo s...

Collection: 19057;15520;16791;18573

6.00M cellsID: geo_GSE65360

MSSM_Cohort

CELLxGENE CensusscRNA-seq

Collection: Population-scale cross-disorder atlas of the human prefrontal cortex at single-cell resolution

4.14M cellsID: 37a17b78-486...

Survey of human embryonic development

CELLxGENE CensusscRNA-seq

Collection: A human cell atlas of fetal gene expression

4.06M cellsID: f7c1c579-2dc...

A human cell atlas of fetal gene expression.

Human Cell AtlasscRNA-seq

Collection: The gene expression program underlying the specification of human cell types is of fundamental interest. We generated human cell atlases of gene expression and chromatin accessibility in fetal tissues...

4.06M cellsID: a9301beb-e9f...

Major cell cluster: Mesoderm

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

3.27M cellsID: dcfa2614-7ca...

snRNA-seq of human retina - all cells

CELLxGENE CensusscRNA-seq

Collection: Single cell atlas of the human retina

3.18M cellsID: d6505c89-c43...

Whole dataset: Normalized subset 2

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

2.86M cellsID: 0bce33ed-455...

Whole dataset: Normalized subset 1

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

2.86M cellsID: a91d5064-aba...

Whole dataset: Normalized subset 3

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

2.86M cellsID: e6a47f6f-ae9...

Whole dataset: Normalized subset 4

CELLxGENE CensusscRNA-seq

Collection: A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

2.86M cellsID: b47eaa46-508...
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